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  5. Gb_32130

Gb_32130 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.08 OrthoFinder output from all 47 species
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.03 OrthoFinder output from all 47 species
AT3G16830 TPR2 TOPLESS-related 2 0.06 OrthoFinder output from all 47 species
Adi_g003873 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Adi_g012443 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019392 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Adi_g053089 TPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056043 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Adi_g117102 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.06 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.07 OrthoFinder output from all 47 species
Als_g21344 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Als_g26654 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27970 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Als_g34066 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54212.t2 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G073000.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g03492 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08671 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g25643 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015571001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
GSVIVT01017343001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 OrthoFinder output from all 47 species
GSVIVT01031186001 TPR3 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
Gb_39002 TPR2 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14980.1 TPR1, LOC_Os03g14980 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Lfl_g40403 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
MA_10430083g0010 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.1 OrthoFinder output from all 47 species
MA_10436445g0020 TPR1 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
MA_16979g0010 TPL, WSIP1 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
MA_16979g0020 TPL, WSIP1 Topless-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8901047g0010 TPR2 Topless-related protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_98943g0010 TPR2 Protein TPR1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g32244 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04998 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g17223 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.07 OrthoFinder output from all 47 species
Ore_g35084 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Smo163891 TPR1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
Solyc03g116750.3.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.05 OrthoFinder output from all 47 species
Spa_g07978 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Spa_g45611 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.09 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
Zm00001e040187_P001 TPR1, Zm00001e040187 transcriptional repressor (TPL). transcriptional... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 913 945
IPR001680 WD40_repeat 448 482
No external refs found!