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  5. Gb_31684

Gb_31684 (PAT1)


Aliases : PAT1

Description : transcription factor (GRAS)


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_31684

Target Alias Description ECC score Gene Family Method Actions
Aob_g14312 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G064200.1 PAT1, Ceric.26G064200 GRAS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g13669 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28608 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17182 SCL21 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038811_P001 PAT1, Zm00001e038811 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 292 661
No external refs found!