Gb_31516

Description : NSR RNA splicing regulator

Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_31516

Target	Alias	Description	ECC score	Gene Family Method
Adi_g078877	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10436362g0010	No alias	NSR RNA splicing regulator	0.01	OrthoFinder output from all 47 species
Ore_g38316	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g08348	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18745	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g071050.4.1	Solyc04g071050	NSR RNA splicing regulator	0.02	OrthoFinder output from all 47 species
Solyc06g052140.3.1	Solyc06g052140	NSR RNA splicing regulator	0.02	OrthoFinder output from all 47 species
Solyc06g052143.1.1	Solyc06g052143	NSR RNA splicing regulator	0.02	OrthoFinder output from all 47 species
Solyc06g052147.1.1	Solyc06g052147	NSR RNA splicing regulator	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	282	352

External Links

No external refs found!