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  5. Gb_30448

Gb_30448 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30448
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00183740 AMY2, ATAMY2,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Adi_g021932 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01617 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28422 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69140.t1 AMY1, ATAMY1,... alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39307 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031740001 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
GSVIVT01031742001 AMY1, ATAMY1 Alpha-amylase OS=Vigna mungo 0.02 OrthoFinder output from all 47 species
GSVIVT01031743001 AMY1, ATAMY1 Alpha-amylase OS=Vigna mungo 0.03 OrthoFinder output from all 47 species
Gb_30449 AMY1, ATAMY1 alpha amylase 0.02 OrthoFinder output from all 47 species
LOC_Os06g49970.2 AMY1, ATAMY1,... alpha amylase 0.08 OrthoFinder output from all 47 species
Len_g01238 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24732 AMY1, ATAMY1 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
MA_217935g0010 AMY1, ATAMY1 alpha amylase 0.04 OrthoFinder output from all 47 species
MA_30833g0020 AMY1, ATAMY1 alpha amylase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025581 AMY1, ATAMY1 alpha amylase & original description: CDS=214-2031 0.03 OrthoFinder output from all 47 species
Solyc04g078930.4.1 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 211 496
IPR012850 A-amylase_bs_C 515 574
No external refs found!