1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_30049

Gb_30049 (TCP2)


Aliases : TCP2

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30049
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00041830 TCP10,... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.01 OrthoFinder output from all 47 species
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.03 OrthoFinder output from all 47 species
Adi_g060601 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02912.t1 ATTCP24, TCP24,... TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02926.t1 TCP3, Aspi01Gene02926 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G069500.1 TCP2, Ceric.37G069500 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g18891 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01032911001 TCP13, TFPD, PTF1 RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
Gb_37187 TCP3 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_38377 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g05720.1 TCP2, LOC_Os07g05720 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g24480.1 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Len_g11401 TCP5 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_12784g0010 ATTCP24, TCP24 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
MA_15254g0010 TCP13, TFPD, PTF1 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_86651g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g04093 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g23969 TCP4, MEE35 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo89227 TCP2 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g045030.2.1 TCP12, BRC2,... transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc06g069240.2.1 TCP12, BRC2,... transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc06g069460.3.1 TCP5, Solyc06g069460 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc10g082063.1.1 TCP13, TFPD,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Spa_g55051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 189 382
No external refs found!