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  5. Gb_29139

Gb_29139 (NYC1)


Aliases : NYC1

Description : component NYC1 of chlorophyll b reductase complex


Gene families : OG0002161 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29139
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT4G13250 NYC1 NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from all 47 species
Ala_g03826 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.03 OrthoFinder output from all 47 species
Als_g12205 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.04 OrthoFinder output from all 47 species
Aop_g28819 NOL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12100 NOL component *(NOL) of chlorophyll b reductase complex &... 0.02 OrthoFinder output from all 47 species
Dde_g25639 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015384001 NYC1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12710.1 NYC1, LOC_Os01g12710 component NYC1 of chlorophyll b reductase complex 0.05 OrthoFinder output from all 47 species
LOC_Os03g45194.1 NOL, LOC_Os03g45194 component NOL of chlorophyll b reductase complex 0.05 OrthoFinder output from all 47 species
Mp4g07280.1 NYC1 component NYC1 of chlorophyll b reductase complex 0.02 OrthoFinder output from all 47 species
Msp_g09802 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.04 OrthoFinder output from all 47 species
Ore_g11018 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.04 OrthoFinder output from all 47 species
Pnu_g11337 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g02275 NYC1 component *(NYC1) of chlorophyll b reductase complex &... 0.02 OrthoFinder output from all 47 species
Sam_g38593 No alias component *(NYC1) of chlorophyll b reductase complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e016407_P001 NYC1, Zm00001e016407 component NYC1 of chlorophyll b reductase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 275 480
No external refs found!