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  5. Gb_26075

Gb_26075 (RPT1A)


Aliases : RPT1A

Description : regulatory component RPT1 of 26S proteasome


Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26075

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0051.g031375 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.16 RPT1A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Cre14.g625400 RPT1A Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Dde_g03314 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54340.1 RPT1A, LOC_Os02g54340 regulatory component RPT1 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g10926 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp2g04840.1 RPT1A regulatory component RPT1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Pnu_g07129 RPT1A regulatory component *(RPT1) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc06g063140.4.1 RPT1A, Solyc06g063140 regulatory component RPT1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e023743_P001 RPT1A, Zm00001e023743 regulatory component RPT1 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!