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Gb_25882


Description : Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica (sp|q10b98|c3h25_orysj : 288.0)


Gene families : OG0007393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25882
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Ceric.22G011300.1 Ceric.22G011300 component *(Bud13) of non-snRNP MOS4-associated complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01024759001 No alias Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 135 155
IPR000504 RRM_dom 38 108
No external refs found!