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  5. Gb_25645

Gb_25645


Description : metabolite transporter (DTX)


Gene families : OG0000713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25645
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00191740 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AMTR_s00070p00181900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00047440 ZF14,... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AT5G49130 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Adi_g114941 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18449 ZF14 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G087900.1 ZF14, Ceric.07G087900 metabolite transporter *(DTX) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_20431 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Gb_37052 ZF14 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g62270.1 LOC_Os03g62270 metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
MA_118262g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_2674g0010 ZF14 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Mp1g16390.1 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Nbi_g36060 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26938 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17339 ZF14 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014972 No alias metabolite transporter *(DTX) & original description:... 0.03 OrthoFinder output from all 47 species
Smo111626 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Zm00001e041426_P001 Zm00001e041426 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 41 201
IPR002528 MATE_fam 262 423
No external refs found!