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  5. Gb_25312

Gb_25312


Description : primase component POLA3 of DNA polymerase alpha complex


Gene families : OG0007515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25312
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G67320 No alias DNA primase, large subunit family 0.06 OrthoFinder output from all 47 species
Als_g00918 No alias primase component *(POLA3) of DNA polymerase alpha... 0.06 OrthoFinder output from all 47 species
Aop_g06919 No alias primase component *(POLA3) of DNA polymerase alpha... 0.05 OrthoFinder output from all 47 species
Azfi_s0242.g059810 No alias primase component *(POLA3) of DNA polymerase alpha... 0.1 OrthoFinder output from all 47 species
Ceric.22G004000.1 Ceric.22G004000 primase component *(POLA3) of DNA polymerase alpha... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.68 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.11 OrthoFinder output from all 47 species
Cre06.g293000 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 OrthoFinder output from all 47 species
Dac_g13828 No alias primase component *(POLA3) of DNA polymerase alpha... 0.08 OrthoFinder output from all 47 species
Dcu_g14762 No alias primase component *(POLA3) of DNA polymerase alpha... 0.1 OrthoFinder output from all 47 species
GSVIVT01029087001 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 OrthoFinder output from all 47 species
LOC_Os07g22400.2 LOC_Os07g22400 primase component POLA3 of DNA polymerase alpha complex 0.11 OrthoFinder output from all 47 species
MA_99205g0020 No alias primase component POLA3 of DNA polymerase alpha complex 0.12 OrthoFinder output from all 47 species
Mp7g17480.1 No alias primase component POLA3 of DNA polymerase alpha complex 0.13 OrthoFinder output from all 47 species
Msp_g07837 No alias primase component *(POLA3) of DNA polymerase alpha... 0.06 OrthoFinder output from all 47 species
Nbi_g10404 No alias primase component *(POLA3) of DNA polymerase alpha... 0.03 OrthoFinder output from all 47 species
Ppi_g63485 No alias primase component *(POLA3) of DNA polymerase alpha... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015210 No alias primase component *(POLA3) of DNA polymerase alpha... 0.06 OrthoFinder output from all 47 species
Sam_g38827 No alias primase component *(POLA3) of DNA polymerase alpha... 0.03 OrthoFinder output from all 47 species
Solyc04g045530.4.1 Solyc04g045530 primase component POLA3 of DNA polymerase alpha complex 0.07 OrthoFinder output from all 47 species
Spa_g08160 No alias primase component *(POLA3) of DNA polymerase alpha... 0.06 OrthoFinder output from all 47 species
Tin_g10410 No alias primase component *(POLA3) of DNA polymerase alpha... 0.15 OrthoFinder output from all 47 species
Zm00001e039405_P003 Zm00001e039405 primase component POLA3 of DNA polymerase alpha complex 0.02 OrthoFinder output from all 47 species
Zm00001e040751_P005 Zm00001e040751 primase component POLA3 of DNA polymerase alpha complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006269 DNA replication, synthesis of RNA primer IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007238 DNA_primase_lsu_euk/arc 17 116
No external refs found!