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Description : component PININ of RNA quality control Exon Junction complex
Gene families : OG0004599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_25267 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00173p00035440 | evm_27.TU.AmTr_v1... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117590 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09559 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g49520.1 | LOC_Os03g49520 | component PININ of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_49744g0010 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g104560.3.1 | Solyc01g104560 | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10098 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005379_P001 | Zm00001e005379 | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012229_P001 | Zm00001e012229 | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006786 | Pinin_SDK_MemA | 2 | 91 |
| No external refs found! |