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  5. Gb_24873

Gb_24873 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24873
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00046860 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.04 OrthoFinder output from all 47 species
Aev_g14301 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26788 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64876 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z168500.1 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g10734 KS, KS1, ATKS1, ATKS, GA2 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50437 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036724001 KS, KS1, ATKS1, ATKS, GA2 Phytohormones.gibberellin.synthesis.ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
Gb_00720 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.05 OrthoFinder output from all 47 species
Gb_06621 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_35203 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_39995 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36140.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g09900.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
LOC_Os04g10060.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.04 OrthoFinder output from all 47 species
Len_g22132 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10378945g0010 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
MA_10435309g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
MA_10435706g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10435715g0010 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_86213g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.03 OrthoFinder output from all 47 species
Mp2g24630.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Mp2g24640.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Mp3g13150.1 CPS, ATCPS1,... Bifunctional isopimaradiene synthase, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp6g05430.1 TPS04, TPS4, GES Bifunctional levopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38613 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06932 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19221 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25469 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo112927 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.04 OrthoFinder output from all 47 species
Solyc08g005670.2.1 Solyc08g005670 Beta-phellandrene synthase... 0.03 OrthoFinder output from all 47 species
Solyc08g005677.1.1 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.04 OrthoFinder output from all 47 species
Solyc08g005710.3.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Spa_g49249 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002123_P001 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.05 OrthoFinder output from all 47 species
Zm00001e004695_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.04 OrthoFinder output from all 47 species
Zm00001e006972_P001 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 378 427
IPR001906 Terpene_synth_N 462 580
No external refs found!