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  5. Gb_24624

Gb_24624


Description : anion transporter (NRT1/PTR)


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24624
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00176510 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00212730 ATPTR3, PTR3,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00067p00181600 ATPTR3, PTR3,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00102920 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00162p00033960 NRT1:2, NTL1,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00256p00011920 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.05 OrthoFinder output from all 47 species
AT1G12110 NRT1.1, B-1,... nitrate transporter 1.1 0.08 OrthoFinder output from all 47 species
AT1G68570 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72140 No alias Major facilitator superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G54140 PTR1, ATPTR1 peptide transporter 1 0.04 OrthoFinder output from all 47 species
AT5G46050 ATPTR3, PTR3 peptide transporter 3 0.05 OrthoFinder output from all 47 species
AT5G62730 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g025431 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33706 NRT1.7 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05074.t1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10147.t1 NRT1.7, Aspi01Gene10147 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58114.t1 NRT1.5, Aspi01Gene58114 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075000.1 PTR1, ATPTR1,... anion transporter *(NRT1/PTR) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z013000.1 Ceric.1Z013000 anion transporter *(NRT1/PTR) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G027500.1 NRT1.7, Ceric.32G027500 anion transporter *(NRT1/PTR) & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g06934 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16901 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020076001 NRT1:2, NTL1, ATNRT1:2 Solute transport.carrier-mediated transport.MFS... 0.1 OrthoFinder output from all 47 species
GSVIVT01021298001 CAD1 Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
GSVIVT01026065001 No alias Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
GSVIVT01026067001 No alias Solute transport.carrier-mediated transport.MFS... 0.07 OrthoFinder output from all 47 species
Gb_25158 NRT1.1, B-1,... anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
LOC_Os02g47090.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50950.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27050.1 LOC_Os05g27050 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os05g34030.1 LOC_Os05g34030 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
LOC_Os10g02220.4 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
LOC_Os10g02260.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.05 OrthoFinder output from all 47 species
LOC_Os10g33210.1 ATPTR3, PTR3,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Len_g45779 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427079g0020 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.04 OrthoFinder output from all 47 species
MA_4777183g0010 No alias anion transporter (NRT1/PTR) 0.05 OrthoFinder output from all 47 species
MA_650284g0010 No alias Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_985g0020 No alias anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Mp2g04630.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Mp3g13080.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Mp5g04930.1 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Mp5g08940.1 NRT1.1, B-1,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Mp8g06300.1 No alias anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
Mp8g15680.1 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Pir_g63910 No alias anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06561 NRT1.7 anion transporter *(NRT1/PTR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012237 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: CDS=76-2016 0.03 OrthoFinder output from all 47 species
Smo234606 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
Smo88337 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Smo91845 PTR1, ATPTR1 Solute transport.carrier-mediated transport.MFS... 0.06 OrthoFinder output from all 47 species
Solyc01g080870.3.1 NRT1.5, Solyc01g080870 anion transporter (NRT1/PTR) 0.06 OrthoFinder output from all 47 species
Solyc04g079520.3.1 Solyc04g079520 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc05g006920.4.1 NRT1.7, Solyc05g006920 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc05g009500.3.1 Solyc05g009500 multi-functional transporter (NPF3.1). anion transporter... 0.03 OrthoFinder output from all 47 species
Solyc08g007060.4.1 NRT1.5, Solyc08g007060 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc09g014230.2.1 PTR1, ATPTR1,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Solyc09g090470.3.1 ATPTR3, PTR3,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e012712_P001 ATPTR3, PTR3,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e031670_P002 Zm00001e031670 anion transporter (NRT1/PTR) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 109 548
No external refs found!