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  5. Gb_24473

Gb_24473 (DCP5)


Aliases : DCP5

Description : regulatory component DCP5 of mRNA decapping complex


Gene families : OG0001620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24473

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250820 DCP5,... RNA processing.RNA decay.deadenylation-dependent... 0.03 OrthoFinder output from all 47 species
Adi_g043388 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055165 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14170 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G085100.1 DCP5, Ceric.20G085100 not classified & original description: pacid=50567155... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.122 DCP5 No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01011971001 DCP5 RNA processing.RNA decay.deadenylation-dependent... 0.05 OrthoFinder output from all 47 species
GSVIVT01036888001 DCP5-L Protein decapping 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g06158 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g01960.1 DCP5 regulatory component DCP5 of mRNA decapping complex 0.03 OrthoFinder output from all 47 species
Pnu_g16897 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007896 DCP5 not classified & original description: CDS=166-1788 0.03 OrthoFinder output from all 47 species
Spa_g47486 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025652_P002 DCP5, Zm00001e025652 regulatory component DCP5 of mRNA decapping complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025609 Lsm14-like_N 12 85
IPR019050 FDF_dom 450 555
No external refs found!