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  5. Gb_23490

Gb_23490


Description : Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica (sp|k4pw38|rss3_orysj : 134.0)


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23490
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00074360 evm_27.TU.AmTr_v1... Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G60060 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.03 OrthoFinder output from all 47 species
Als_g05963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g50633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0413.g068586 No alias not classified & original description: CDS=761-2020 0.04 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G075900.1 Ceric.11G075900 not classified & original description: pacid=50596654... 0.03 OrthoFinder output from all 47 species
Ceric.31G047700.1 Ceric.31G047700 not classified & original description: pacid=50574676... 0.05 OrthoFinder output from all 47 species
Dac_g01426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g28500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18534 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12740.1 LOC_Os06g12740 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g02266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_115450g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Msp_g00512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g14071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13057 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078520.3.1 Solyc04g078520 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc05g005810.4.1 Solyc05g005810 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e015792_P001 Zm00001e015792 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 17 205
No external refs found!