Gb_23470


Description : no hits & (original description: none)


Gene families : OG0004902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004902_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23470
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00109260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g113330 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0560.g076945 No alias not classified & original description: CDS=396-3839 0.03 OrthoFinder output from all 47 species
Ceric.17G006000.1 Ceric.17G006000 not classified & original description: pacid=50617872... 0.03 OrthoFinder output from all 47 species
Dcu_g11941 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g10765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10728 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_128292g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26994g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g08850.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g36831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g45355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011303 No alias not classified & original description: CDS=348-2951 0.05 OrthoFinder output from all 47 species
Sam_g37164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g071040.4.1 Solyc06g071040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g36512 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!