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  5. Gb_23221

Gb_23221


Description : fasciclin-type arabinogalactan protein


Gene families : OG0001815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00053270 FLA20,... No description available 0.02 OrthoFinder output from all 47 species
Aspi01Gene70725.t1 Aspi01Gene70725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 252 349
No external refs found!