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  5. Gb_23220

Gb_23220 (CCoAOMT1)


Aliases : CCoAOMT1

Description : caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)


Gene families : OG0000545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23220
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00228690 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00069700 CCoAOMT1,... Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.01 OrthoFinder output from all 47 species
AT1G24735 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT1G67980 CCOAMT caffeoyl-CoA 3-O-methyltransferase 0.04 OrthoFinder output from all 47 species
AT1G67990 TSM1, ATTSM1 S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
AT4G26220 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT4G34050 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases... 0.05 OrthoFinder output from all 47 species
Adi_g117038 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aev_g28107 CCOAMT EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g12060 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g25628 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04490.t1 CCoAOMT1, Aspi01Gene04490 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43044.t1 CCoAOMT1, Aspi01Gene43044 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g69967 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.16G046400.1 CCoAOMT1, Ceric.16G046400 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.20G047900.1 CCoAOMT1, Ceric.20G047900 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ceric.35G070100.1 CCoAOMT1, Ceric.35G070100 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g07343 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g14743 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ehy_g27050 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01010463001 No alias Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
GSVIVT01010466001 CCOAMT Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.07 OrthoFinder output from all 47 species
GSVIVT01010469001 CCOAMT Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01015245001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.01 OrthoFinder output from all 47 species
GSVIVT01031715001 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.05 OrthoFinder output from all 47 species
Gb_12670 No alias caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.04 OrthoFinder output from all 47 species
LOC_Os06g06980.1 CCoAOMT1, LOC_Os06g06980 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38900.1 CCoAOMT1, LOC_Os08g38900 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38920.1 CCoAOMT1, LOC_Os08g38920 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.02 OrthoFinder output from all 47 species
LOC_Os09g30360.1 CCoAOMT1, LOC_Os09g30360 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.02 OrthoFinder output from all 47 species
Len_g13872 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g06891 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_10428317g0010 CCoAOMT1 Caffeoyl-CoA O-methyltransferase OS=Pinus taeda... 0.02 OrthoFinder output from all 47 species
MA_628392g0010 CCoAOMT1 Caffeoyl-CoA O-methyltransferase OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_681896g0010 CCoAOMT1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g24961 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g26970 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pnu_g33610 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006795 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo271191 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
Smo80209 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
Solyc01g107910.4.1 CCoAOMT1, Solyc01g107910 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
Solyc02g093230.4.1 CCoAOMT1, Solyc02g093230 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.04 OrthoFinder output from all 47 species
Solyc03g032220.3.1 Solyc03g032220 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.08 OrthoFinder output from all 47 species
Solyc05g026040.1.1 CCOAMT, Solyc05g026040 Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes... 0.07 OrthoFinder output from all 47 species
Solyc09g082660.3.1 CCOAMT, Solyc09g082660 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.04 OrthoFinder output from all 47 species
Solyc10g050160.2.1 CCoAOMT1, Solyc10g050160 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.05 OrthoFinder output from all 47 species
Tin_g43456 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Zm00001e024348_P001 CCoAOMT1, Zm00001e024348 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.05 OrthoFinder output from all 47 species
Zm00001e036403_P001 CCoAOMT1, Zm00001e036403 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002935 SAM_O-MeTrfase 40 250
No external refs found!