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  5. Gb_23214

Gb_23214 (CCoAOMT1)


Aliases : CCoAOMT1

Description : caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)


Gene families : OG0000545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23214

Target Alias Description ECC score Gene Family Method Actions
AT1G24735 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Ala_g12060 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Ehy_g16436 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g16437 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015245001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.05 OrthoFinder output from all 47 species
GSVIVT01015246001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
LOC_Os09g30360.1 CCoAOMT1, LOC_Os09g30360 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.02 OrthoFinder output from all 47 species
Lfl_g11414 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g27155 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Msp_g24961 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g10113 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g03924 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g39108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33610 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Solyc03g032220.3.1 Solyc03g032220 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
Zm00001e010046_P002 CCoAOMT1, Zm00001e010046 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002935 SAM_O-MeTrfase 36 247
No external refs found!