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  5. Gb_22423

Gb_22423 (YAB5)


Aliases : YAB5

Description : transcription factor (YABBY)


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22423
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01012246001 CRC RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
LOC_Os04g45330.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
LOC_Os07g06620.2 YAB2, LOC_Os07g06620 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
LOC_Os12g42610.1 YAB5, LOC_Os12g42610 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
MA_10432332g0010 YAB5 transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Solyc01g010240.3.1 CRC, Solyc01g010240 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Solyc01g091010.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Solyc08g079100.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Solyc11g071810.2.1 YAB2, Solyc11g071810 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Zm00001e012577_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Zm00001e035310_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Zm00001e038717_P002 CRC, Zm00001e038717 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e041322_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006780 YABBY 57 192
No external refs found!