Description : E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum (sp|p0ch30|ring1_goshi : 173.0)
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G18770 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G60360 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G13228 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G13430 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g017038 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g020451 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01231 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g03172 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g04888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g22643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g46210 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aob_g05181 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g29180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene15226.t1 | Aspi01Gene15226 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene33056.t1 | Aspi01Gene33056 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene58136.t1 | Aspi01Gene58136 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Cba_g73123 | AIP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G061800.1 | Ceric.02G061800 | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G002100.1 | Ceric.14G002100 | not classified & original description: pacid=50633322... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.14G083100.1 | Ceric.14G083100 | not classified & original description: pacid=50633279... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000571.7 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g03848 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09533 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g32754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g00451 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g01127 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g02398 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g27311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_22125 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g44240.1 | LOC_Os01g44240 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g20870.1 | LOC_Os03g20870 | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g41520.1 | RHC1A, LOC_Os05g41520 | Probable E3 ubiquitin-protein ligase RHC1A... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g01200.1 | LOC_Os06g01200 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.03 | OrthoFinder output from all 47 species | |
Len_g07549 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g22017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05536 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g29620 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
MA_10428335g0020 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.03 | OrthoFinder output from all 47 species | |
MA_413614g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g10979 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g41837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g41838 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g23528 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g23756 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g24146 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g24945 | CIP8 | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g29204 | RHC1A | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08830 | RHC1A | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g00999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0040.g012286 | No alias | not classified & original description: CDS=1-1674 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0106.g020256 | No alias | not classified & original description: CDS=1-1698 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g05103 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g008440.1.1 | Solyc12g008440 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g20368 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g40688 | RHC1A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e016135_P001 | Zm00001e016135 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e024003_P001 | Zm00001e024003 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038273_P001 | Zm00001e038273 | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |