Gb_22123


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 211.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22123
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Adi_g004844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024544 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g038928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g119668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g123800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g127432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28677 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34121 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g48539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g50255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00563.t1 Aspi01Gene00563 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00565.t1 Aspi01Gene00565 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08224.t1 Aspi01Gene08224 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08504.t1 Aspi01Gene08504 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09204.t1 Aspi01Gene09204 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10996.t1 CRK8, Aspi01Gene10996 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12944.t1 Aspi01Gene12944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18208.t1 CRK8, Aspi01Gene18208 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18322.t1 Aspi01Gene18322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19274.t1 Aspi01Gene19274 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25393.t1 Aspi01Gene25393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27663.t1 ORF240B, Aspi01Gene27663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29223.t1 Aspi01Gene29223 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31236.t1 Aspi01Gene31236 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31527.t1 Aspi01Gene31527 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33142.t1 Aspi01Gene33142 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39268.t1 Aspi01Gene39268 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene41179.t1 CRK8, Aspi01Gene41179 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46956.t1 Aspi01Gene46956 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50985.t1 Aspi01Gene50985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52980.t1 Aspi01Gene52980 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59929.t1 CRK8, Aspi01Gene59929 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63834.t1 ORF240B, Aspi01Gene63834 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67592.t2 CRK8, Aspi01Gene67592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G073400.1 Ceric.03G073400 not classified & original description: pacid=50573040... 0.03 OrthoFinder output from all 47 species
Ceric.04G034100.1 Ceric.04G034100 not classified & original description: pacid=50631391... 0.03 OrthoFinder output from all 47 species
Ceric.04G043300.1 Ceric.04G043300 not classified & original description: pacid=50631857... 0.03 OrthoFinder output from all 47 species
Ceric.05G069300.1 Ceric.05G069300 not classified & original description: pacid=50577362... 0.03 OrthoFinder output from all 47 species
Ceric.07G036400.1 Ceric.07G036400 not classified & original description: pacid=50626002... 0.03 OrthoFinder output from all 47 species
Ceric.09G063700.1 Ceric.09G063700 not classified & original description: pacid=50588392... 0.03 OrthoFinder output from all 47 species
Ceric.10G075800.1 Ceric.10G075800 not classified & original description: pacid=50612155... 0.03 OrthoFinder output from all 47 species
Ceric.12G025000.1 Ceric.12G025000 not classified & original description: pacid=50601304... 0.03 OrthoFinder output from all 47 species
Ceric.13G016000.1 Ceric.13G016000 not classified & original description: pacid=50636669... 0.03 OrthoFinder output from all 47 species
Ceric.13G049800.1 Ceric.13G049800 not classified & original description: pacid=50636391... 0.03 OrthoFinder output from all 47 species
Ceric.16G048700.1 Ceric.16G048700 not classified & original description: pacid=50589460... 0.03 OrthoFinder output from all 47 species
Ceric.18G001200.1 CRK8, Ceric.18G001200 not classified & original description: pacid=50621792... 0.03 OrthoFinder output from all 47 species
Ceric.18G013600.1 Ceric.18G013600 not classified & original description: pacid=50622178... 0.03 OrthoFinder output from all 47 species
Ceric.21G079700.1 Ceric.21G079700 not classified & original description: pacid=50603141... 0.02 OrthoFinder output from all 47 species
Ceric.22G076900.1 Ceric.22G076900 not classified & original description: pacid=50614764... 0.03 OrthoFinder output from all 47 species
Ceric.23G035000.1 Ceric.23G035000 not classified & original description: pacid=50610725... 0.03 OrthoFinder output from all 47 species
Ceric.24G080000.1 Ceric.24G080000 not classified & original description: pacid=50628615... 0.03 OrthoFinder output from all 47 species
Ceric.28G058400.1 Ceric.28G058400 not classified & original description: pacid=50571006... 0.03 OrthoFinder output from all 47 species
Ceric.35G004700.1 CRK8, Ceric.35G004700 not classified & original description: pacid=50581602... 0.03 OrthoFinder output from all 47 species
Ceric.35G009500.1 CRK8, Ceric.35G009500 not classified & original description: pacid=50581405... 0.03 OrthoFinder output from all 47 species
Dcu_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18937 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18938 ORF111A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27517 No alias Bowman-Birk protease inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32238 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_23260 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_24037 CRK8 Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Gb_28128 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_30803 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_33898 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_40913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Len_g12961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24710 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26953 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16735 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22637 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35118 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35296 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07087 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04356 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22481 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_14360V3.1 Pp3c13_14360 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c14_6702V3.1 Pp3c14_6702 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c20_550V3.1 Pp3c20_550 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Ppi_g45032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g030553.1.1 Solyc11g030553 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Spa_g26206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 1 74
No external refs found!