Heatmap: Cluster_72 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00850	-3.96	-4.15	-3.79	-5.2	-7.69	-2.18	-4.14	-7.41	-4.48	-4.0	-9.47	-8.98	-4.7	-4.36	-9.33	-3.7	-6.75	-4.7	-4.45	4.26
Gb_01905 (BAS1)	-	-	-6.45	-7.12	-5.45	-4.31	-	-3.97	-5.12	-5.85	-4.78	-5.51	-2.74	-3.88	-3.39	-	-5.39	-4.17	-4.68	4.27
Gb_01907 (BAS1)	-	-	-6.45	-7.12	-5.45	-4.31	-	-3.97	-5.12	-5.85	-4.78	-5.51	-2.74	-3.88	-3.39	-	-5.39	-4.17	-4.68	4.27
Gb_02790	-0.32	-0.2	-0.24	0.03	0.58	-5.86	0.96	-0.22	-0.46	-0.56	-2.04	2.27	-2.35	-0.89	-2.15	-1.23	-0.7	0.14	1.17	-1.66
Gb_03018 (PIN1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_03228	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-
Gb_03408 (MLO6)	2.11	-	-	-	-	-	-	1.55	0.43	-	-	0.36	1.66	-	2.8	-	-	-	-	-
Gb_03755	0.07	-	-	3.33	-	-	-	0.8	-	0.22	-	-	-	-	0.85	-	-	0.99	1.13	-
Gb_04489	0.21	-1.87	-0.52	-0.64	0.23	-0.34	-2.76	0.34	-1.24	-0.64	-0.61	-0.76	-1.79	-1.84	-0.02	0.53	0.7	1.49	0.37	1.49
Gb_04706 (OPCL1)	-4.79	-	-	-	-1.42	1.98	-0.21	-1.76	-4.46	-	0.2	-0.74	0.59	-2.79	-1.48	-	-	2.85	1.38	-0.17
Gb_04782	-	-	-	3.39	-	-	-	-3.44	-	-	-	0.3	1.01	1.79	-	-	-	1.19	-1.14	-
Gb_05496 (CRK8)	-	-	-	-	-	-	-	2.71	3.75	-	-	-	-	-	-	-	-	-	-	-
Gb_05788	-0.32	-1.71	-3.58	0.55	1.06	-6.48	-7.53	-0.8	-2.52	-5.18	-5.78	-3.64	-7.85	-4.54	-4.56	1.01	-0.72	2.18	1.86	1.8
Gb_06148 (GH3.17)	0.6	1.72	-1.37	-1.28	0.48	-0.84	-0.03	-1.92	-2.97	-	-0.27	-5.54	-4.82	-3.65	0.14	-0.92	-	2.01	-1.74	2.06
Gb_06309 (CRK8)	4.03	-	-	-	-	-	-	-7.64	-	-	-	-	-	-	-	-	-	-	1.88	-
Gb_06944	-	-	-	-	3.31	-	-	-0.48	-	-	-	-	-	-	-	-	-	-	3.23	-
Gb_07379	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08843	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_09235	-	-	-0.01	2.1	-3.12	-	0.38	-0.0	0.31	-4.27	0.89	-	0.9	0.53	-	1.87	0.49	-	-0.36	-
Gb_09506 (AQP1)	-2.56	-2.62	-3.96	-3.7	-0.12	0.23	-6.25	-1.15	0.01	0.09	0.27	-0.76	-1.07	-0.73	1.02	1.33	0.21	0.86	-0.39	1.9
Gb_10342 (ARD4)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_10524 (LBD15)	-1.82	-	-	1.11	1.43	-1.41	-2.3	-1.87	-	-4.64	-	-4.13	-	-	-	-0.36	-0.22	1.66	1.88	2.45
Gb_11270	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_11394	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_12149	-	-	2.69	-	-	-	2.58	-2.84	-	-	-	-	-	-	-	-	-	2.04	1.73	-
Gb_12546 (ZFP1)	-0.58	-	-	-	-0.6	2.26	1.32	-	-	-	-	-	-	-	-	-	-	-	0.69	3.29
Gb_13039 (LPR1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.24	3.4
Gb_13397	-5.56	-4.42	-5.54	-2.38	-0.29	-2.11	-5.11	-1.55	-1.93	-1.71	-0.55	-0.26	-2.25	-2.33	-0.14	-0.71	-0.96	0.11	0.2	3.53
Gb_13713 (CPS)	-	-	-	-1.65	-2.14	1.6	-3.92	-0.23	-0.03	-1.87	-2.37	-5.33	-1.01	-0.76	-0.06	-	-5.54	3.56	-4.73	-3.44
Gb_14049 (AST91)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_14060	-1.77	-	-	3.6	-	-	-	-1.81	-2.39	-	-	-	-	-0.62	-	-0.46	-	-	2.25	-0.02
Gb_14375 (ARFA1F)	-	-	-	-	-	-3.01	2.09	-2.6	-	-5.02	-3.38	-	-	-3.73	-	-	-	3.3	-0.51	2.22
Gb_14487	0.15	-0.81	-1.24	1.06	0.63	-1.61	-1.21	-0.24	-1.17	-1.32	-1.09	-1.48	-3.16	-2.44	-0.76	1.18	0.75	0.51	1.8	0.32
Gb_14853	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-
Gb_15654	-	-	-	2.53	-	-	1.22	0.12	-0.77	0.08	-	-0.98	-	-	-	-	-	-	3.12	-
Gb_16167	-	-	-	-8.46	-	1.64	-	-0.06	1.1	3.0	-	-	-	-	-	-	-	-	2.54	-
Gb_16296	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_16403 (ATP6-2)	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17088	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17446	-0.57	-1.01	-0.78	-0.39	-0.41	-0.28	-2.02	0.05	-0.44	-0.35	0.96	1.5	-2.58	-1.56	0.97	0.12	0.51	0.61	0.0	-0.26
Gb_17795	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_19186	1.33	-	-	-	2.23	-	-	1.31	-	-	-	-	0.89	-	-	-	-	-	3.08	-
Gb_19718	1.79	-	-	-	-	-	-	0.03	-0.09	0.68	-	-	-	0.1	-5.05	-	1.99	-	2.98	-
Gb_20548 (HSP70)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_20731	-1.26	-	-	2.54	0.88	2.61	-2.41	-0.94	-4.14	-	-	-4.55	-	-	-	-	-1.11	0.11	0.3	1.15
Gb_20732	-5.15	-	-	0.47	-2.01	2.6	-3.43	-1.93	-3.75	-	-4.18	-3.23	-3.85	-4.05	-4.35	-	-	0.12	-0.63	3.29
Gb_20879	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_21306	-	4.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.64	-
Gb_21450	2.09	2.12	1.21	1.21	1.41	-4.5	1.31	-3.93	-7.7	-8.85	-7.7	-7.41	-11.02	-8.27	-	-8.93	-8.52	-1.69	-3.44	0.14
Gb_21456	-	2.36	0.34	-	3.4	-	-	0.48	-	-	-	-	-	-	-	-6.79	-	0.68	-	-
Gb_21980	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_22123	-	-	-	-	-	-	-	1.17	-	-	-	-	-	-	-	-	-	-	4.15	-
Gb_22374	-2.47	1.17	-	1.91	3.14	-1.19	-	-1.31	-2.68	-	-	-	-	-	-	-	-	1.55	-0.69	-1.2
Gb_23397 (OMT1)	-	-	-	0.82	1.59	-	-	0.01	-2.48	-	-	-	0.11	-0.77	-	-	-	2.96	1.46	0.87
Gb_24552 (ROPGEF14)	0.52	-0.84	-0.09	0.57	-0.14	-0.35	-3.09	-0.05	-1.08	-0.83	-0.52	0.02	-2.34	-2.37	-0.58	-0.66	0.79	1.55	1.17	0.54
Gb_24826 (PRR1)	-	-	-	-	-	3.97	-	-	-	-	-	-	-	-	-	-	-	-	2.13	-
Gb_25079 (CAP1)	-	-	-	-	-	-	3.93	2.24	-	-	-	-	-	-	-	-	-	-	-	-
Gb_25247 (BAS1)	-0.31	-1.21	0.09	-0.2	1.8	-2.07	-0.97	-1.81	-2.69	-2.36	-1.28	-1.61	-4.84	-4.95	-0.65	-0.53	-0.57	0.13	-3.4	2.99
Gb_25463 (SSI2)	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_26562	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_27201	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.0	-	3.58	-	-	-
Gb_27262	-1.99	-1.28	-1.5	0.88	1.79	0.83	-4.63	-1.61	-3.59	-4.41	-2.36	-1.18	-4.65	-2.28	-2.39	0.25	-2.17	0.93	-0.44	2.65
Gb_27400	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-
Gb_27932 (CRK2)	0.75	-1.41	-0.07	0.6	0.66	0.18	-5.62	-0.23	-0.01	-0.22	-1.14	-0.31	-3.27	-2.55	-1.03	0.96	0.42	0.78	0.97	0.06
Gb_28793	-	-	-	-	-0.34	1.41	-1.27	0.15	-	-	-0.54	-2.28	-	-	-	0.2	-0.38	2.36	1.31	2.2
Gb_29104	1.06	-4.97	-0.46	-2.84	-3.32	-6.84	-3.02	-1.75	-1.02	-0.59	-1.69	1.89	-3.94	-3.51	-2.09	-1.95	0.36	-1.25	-4.95	3.16
Gb_29546	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30240	2.83	-	-	-	-	-	-	-0.45	-	-	-	-	-	-	-	-	-	-	3.61	-
Gb_30956	0.66	1.74	0.62	0.36	1.59	-0.76	0.08	-1.73	-2.53	-2.47	-1.15	-1.71	-3.15	-3.63	-0.69	-2.5	-3.35	1.22	1.14	-0.81
Gb_32272	-0.95	-	-	-	-	2.3	1.15	0.63	-	-	-	-	1.32	0.84	2.7	-	-	-	-	-
Gb_32302 (AQP1)	-2.56	-2.62	-3.96	-3.7	-0.12	0.23	-6.25	-1.15	0.01	0.09	0.27	-0.76	-1.07	-0.73	1.02	1.33	0.21	0.86	-0.39	1.9
Gb_32474	-	-	-	-	-	0.11	-	1.37	-0.71	-	2.42	0.3	1.57	1.24	-0.52	-	-	1.33	-0.79	-
Gb_32486	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_33377	-0.63	-	-	0.93	-0.14	-0.8	-0.75	-0.54	-	-	-	-3.74	-	-	-	-1.48	-1.39	2.74	2.51	0.59
Gb_33562	-	-	-	-	-	-	-	1.14	-	-	-	-	-	-	4.15	-	-	-	-	-
Gb_33741 (ORF170)	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_34022 (OMT1)	-2.22	-1.83	-4.31	1.43	1.23	0.72	-0.37	-1.32	-2.09	-1.73	-3.19	-2.02	-1.35	-1.85	-5.46	-4.58	-1.07	0.79	0.39	2.69
Gb_34176	-2.95	-2.61	-2.56	-0.02	-0.51	-2.94	0.45	-1.49	-0.71	0.07	-0.18	-2.1	-1.26	-1.34	-0.84	-1.4	0.45	-0.59	1.59	2.69
Gb_34497 (TT7)	-3.6	-	-	-	-0.47	-3.51	-2.08	0.01	0.83	-0.04	-1.75	-1.48	-1.53	-1.84	-1.31	1.01	2.61	-3.88	1.98	0.38
Gb_34580	3.57	-	-	-	-	-	-	3.03	-	-	-	-	-	-	-	-	-	-	-25.0	-
Gb_34838	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_34882 (MYB68)	-2.95	-1.4	-2.98	-	-0.57	3.19	-4.41	-2.36	-4.73	-3.37	-4.61	-1.42	-5.9	-3.66	-	-3.86	-2.86	-2.71	-3.84	3.04
Gb_35203 (CPS)	-	-	-1.6	-	-	3.99	-	-0.72	-3.49	-	-	-	-2.91	-	-	-	-	1.38	-3.08	-1.89
Gb_35583	-	-	-	-	4.28	-	-	-0.86	-	-	-	-	-	-	-	-	-	-	-	-
Gb_35755	-3.8	-0.5	-3.95	-	-4.89	1.02	-	-3.19	-4.21	-4.21	-2.89	-0.93	-2.88	-3.11	-4.61	-	-	-4.06	-5.92	3.99
Gb_35854 (GUS3)	0.01	-	1.66	-	-	-	0.86	-0.33	-0.33	0.18	-	0.48	-0.27	-	0.9	0.68	-	1.38	1.06	-0.11
Gb_36278 (ATGSTF13)	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_36651	2.47	-	-	-	-12.73	-	-17.94	-1.59	-15.13	-	-16.84	-18.19	-	-	-	3.07	-	-	2.52	-
Gb_37096	2.08	-	1.04	-	-	0.04	0.44	-0.36	1.36	-	-	-	-	-	-	1.73	-	-	1.11	1.32
Gb_37447	-4.57	-3.58	-3.09	-3.04	-0.85	-2.38	-1.81	-0.08	0.36	0.06	0.58	-1.21	0.23	-0.09	0.63	-1.4	-1.58	2.09	2.08	-0.91
Gb_37673	-	-	-	3.83	-	-	-	-0.89	0.99	-	-	-0.64	-	-	-	-	-	-	1.4	-
Gb_37991	-3.28	2.26	-1.8	-0.46	-0.72	2.48	-3.19	-1.77	0.38	0.91	-2.7	-3.35	-	-1.66	0.17	-0.08	-3.31	-1.46	-0.43	-1.1
Gb_38086 (CCB382)	-	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-
Gb_39637 (RD20)	-4.07	-	-	-	-	-2.9	-	-1.55	-4.67	-2.91	-2.2	-	-	-4.61	-0.7	-	-	0.12	0.06	4.03
Gb_39749	0.03	-	-	2.71	-	-	-	-0.57	-1.7	0.18	1.52	-1.95	-	-	0.87	-	-	-	2.42	-
Gb_39839	-	-	-	-	-	-	2.08	1.9	1.71	-0.1	0.66	-0.19	-0.63	-	-	-	-	-	1.64	0.69
Gb_40164	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_40450 (ATCWINV1)	-6.71	-	-	-	-2.31	-4.48	-	-0.06	-1.12	-0.54	-2.99	-3.98	-5.5	-2.14	-2.75	-2.29	1.01	2.04	3.24	0.38
Gb_40607	-	-	-2.29	0.27	1.14	-	-	0.04	1.95	-18.69	0.69	-0.68	1.82	-	-	-	-	-7.69	1.86	1.06
Gb_41316	-	-	-	-	-	-	-	1.07	-	-	-	-	-	-	-	-	-	-	4.16	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.