Aliases : ATRBP47B, RBP47B
Description : mRNA-binding regulatory factor (RBP45/47)
Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre16.g652900 | ATRBP45A, RBP45A | Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g33330.1 | ATRBP45A,... | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
MA_10433660g0010 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08309 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c12_10910V3.1 | Pp3c12_10910 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c12_10960V3.1 | Pp3c12_10960 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.01 | OrthoFinder output from all 47 species | |
Sam_g39083 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g050860.3.1 | ATRBP47B,... | mRNA-binding regulatory factor (RBP45/47) | 0.08 | OrthoFinder output from all 47 species | |
Spa_g51224 | ATRBP47B, RBP47B | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g11427 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 50 | 115 |
No external refs found! |