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  5. Gb_20922

Gb_20922


Description : Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana (sp|o65657|hip23_arath : 178.0)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20922
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00251970 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G18196 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G28660 No alias Chloroplast-targeted copper chaperone protein 0.03 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39700 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G66110 HIPP27 Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g25261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25264 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08721 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36851.t1 Aspi01Gene36851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53128.t1 CCH, Aspi01Gene53128 copper chaperone *(ATX/CCH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G074200.1 Ceric.17G074200 not classified & original description: pacid=50618394... 0.02 OrthoFinder output from all 47 species
Ceric.24G019500.1 Ceric.24G019500 not classified & original description: pacid=50629311... 0.04 OrthoFinder output from all 47 species
Dac_g12205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05175 ATX1, ATATX1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30764 HIPP22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species
GSVIVT01030880001 No alias Heavy metal-associated isoprenylated plant protein 37... 0.04 OrthoFinder output from all 47 species
GSVIVT01030883001 HIPP21 Heavy metal-associated isoprenylated plant protein 21... 0.06 OrthoFinder output from all 47 species
Gb_21295 No alias Heavy metal-associated isoprenylated plant protein 45... 0.02 OrthoFinder output from all 47 species
LOC_Os01g61070.1 LOC_Os01g61070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74490.1 LOC_Os01g74490 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os02g32814.1 SLAH3, LOC_Os02g32814 copper chaperone (CCH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g35060.1 LOC_Os06g35060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39210.1 LOC_Os10g39210 Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
Lfl_g20193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28554 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101835g0010 No alias Heavy metal-associated isoprenylated plant protein 21... 0.03 OrthoFinder output from all 47 species
MA_131067g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_175196g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.04 OrthoFinder output from all 47 species
MA_177721g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_71520g0010 No alias Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
MA_857107g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9303502g0010 No alias Heavy metal-associated isoprenylated plant protein 22... 0.04 OrthoFinder output from all 47 species
Mp8g01830.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g20168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31616 ATX1, ATATX1 copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03527 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022933 No alias not classified & original description: CDS=131-1195 0.04 OrthoFinder output from all 47 species
Smo29653 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.06 OrthoFinder output from all 47 species
Solyc02g083550.2.1 HIPP26, FP6,... Heavy metal-associated isoprenylated plant protein 26... 0.04 OrthoFinder output from all 47 species
Solyc06g050710.4.1 Solyc06g050710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g073020.3.1 Solyc11g073020 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g04154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004204_P001 Zm00001e004204 Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e008507_P003 HIPP27, Zm00001e008507 Heavy metal-associated isoprenylated plant protein 27... 0.05 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028833_P001 Zm00001e028833 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033958_P001 Zm00001e033958 Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 30 85
No external refs found!