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Gb_20861


Description : D-arabinose-5-phosphate isomerase


Gene families : OG0006389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20861
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Ehy_g05459 No alias D-arabinose-5-phosphate isomerase & original description: none 0.05 OrthoFinder output from all 47 species
MA_951138g0010 No alias D-arabinose-5-phosphate isomerase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014347 No alias D-arabinose-5-phosphate isomerase & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 217 274
IPR000644 CBS_dom 285 340
IPR001347 SIS_dom 59 187
No external refs found!