Gb_20375

Description : GTP-binding protein At2g22870 OS=Arabidopsis thaliana (sp|o81004|y2287_arath : 311.0)

Gene families : OG0001817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001817_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20375
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AT2G22870	EMB2001	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT5G11480	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Adi_g043228	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g29056	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g31663	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0084.g039095	No alias	not classified & original description: CDS=51-1235	0.05	OrthoFinder output from all 47 species
Cba_g00944	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.32G033500.1	Ceric.32G033500	not classified & original description: pacid=50598717...	0.04	OrthoFinder output from all 47 species
Cre12.g519700	EMB2001	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g28663	EMB2001	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g03324	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13888	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g00552	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g17266	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11675	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g04362	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13424	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g22637	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g23882	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g09757	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30624	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e038655_P001	EMB2001, Zm00001e038655	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	154	271

External Links

No external refs found!

Gb_20375

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation