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  5. Gb_20236

Gb_20236


Description : no hits & (original description: none)


Gene families : OG0001211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20236
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00212810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00095990 evm_27.TU.AmTr_v1... Lachrymatory-factor synthase OS=Allium cepa 0.03 OrthoFinder output from all 47 species
AT2G25770 No alias Polyketide cyclase/dehydrase and lipid transport... 0.03 OrthoFinder output from all 47 species
AT4G32870 No alias Polyketide cyclase/dehydrase and lipid transport... 0.01 OrthoFinder output from all 47 species
Aspi01Gene67465.t1 Aspi01Gene67465 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0590.g078725 No alias not classified & original description: CDS=218-1081 0.03 OrthoFinder output from all 47 species
Ceric.05G013400.1 Ceric.05G013400 not classified & original description: pacid=50578169... 0.05 OrthoFinder output from all 47 species
Ceric.1Z038800.1 Ceric.1Z038800 not classified & original description: pacid=50569354... 0.05 OrthoFinder output from all 47 species
Ceric.1Z039000.1 Ceric.1Z039000 not classified & original description: pacid=50569360... 0.03 OrthoFinder output from all 47 species
Ceric.1Z039200.1 Ceric.1Z039200 not classified & original description: pacid=50569355... 0.03 OrthoFinder output from all 47 species
Ceric.1Z077100.1 Ceric.1Z077100 not classified & original description: pacid=50573381... 0.04 OrthoFinder output from all 47 species
Ceric.1Z118400.1 Ceric.1Z118400 not classified & original description: pacid=50604680... 0.06 OrthoFinder output from all 47 species
Ceric.1Z171900.1 Ceric.1Z171900 not classified & original description: pacid=50637097... 0.05 OrthoFinder output from all 47 species
Ceric.1Z172000.1 Ceric.1Z172000 not classified & original description: pacid=50637095... 0.03 OrthoFinder output from all 47 species
Ceric.39G050600.1 Ceric.39G050600 not classified & original description: pacid=50582769... 0.01 OrthoFinder output from all 47 species
Ceric.39G051100.1 Ceric.39G051100 not classified & original description: pacid=50583326... 0.04 OrthoFinder output from all 47 species
Dac_g34744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g52570.1 LOC_Os01g52570 Lachrymatory-factor synthase OS=Allium cepa... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11210.1 LOC_Os05g11210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g11250.1 LOC_Os05g11250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g02120.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g06680.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g05710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g11680.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g01901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g50013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g066430.1.1 Solyc08g066430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g25047 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g32982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016508_P001 Zm00001e016508 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019587 Polyketide_cyclase/dehydratase 15 152
No external refs found!