Gb_19817


Description : subunit epsilon of coat protein complex


Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19817

Target Alias Description ECC score Gene Family Method Actions
AT1G30630 No alias Coatomer epsilon subunit 0.04 OrthoFinder output from all 47 species
Aev_g00661 No alias subunit epsilon of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Als_g22069 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007572 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.62 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g00711 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01021747001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
LOC_Os04g52270.1 LOC_Os04g52270 subunit epsilon of coat protein complex 0.03 OrthoFinder output from all 47 species
Len_g08238 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Mp1g28220.1 No alias subunit epsilon of coat protein complex 0.02 OrthoFinder output from all 47 species
Pir_g01239 No alias subunit epsilon of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004429 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Solyc02g069585.1.1 Solyc02g069585 subunit epsilon of coat protein complex 0.06 OrthoFinder output from all 47 species
Tin_g00461 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e041631_P001 Zm00001e041631 subunit epsilon of coat protein complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!