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  5. Gb_19564

Gb_19564


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 106.0)


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19564
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Als_g64166 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54428.t1 Aspi01Gene54428 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_00282 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_02021 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder output from all 47 species
Gb_04117 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.08 OrthoFinder output from all 47 species
Gb_04521 ORF170 Uncharacterized mitochondrial protein AtMg00820... 0.17 OrthoFinder output from all 47 species
Gb_04615 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Gb_04925 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_05080 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_05496 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_06017 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder output from all 47 species
Gb_06309 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_07720 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_08011 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder output from all 47 species
Gb_17136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_17625 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_21999 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_23017 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Gb_28273 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder output from all 47 species
Gb_31472 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_31929 No alias Uncharacterized mitochondrial protein AtMg00820... 0.05 OrthoFinder output from all 47 species
Gb_33741 ORF170 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_36407 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g14349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c4_30930V3.1 Pp3c4_30930 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 12 86
No external refs found!