Gb_18623


Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18623

Target Alias Description ECC score Gene Family Method Actions
AT4G19090 No alias Protein of unknown function (DUF594) 0.02 OrthoFinder output from all 47 species
Adi_g060828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22609.t1 Aspi01Gene22609 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.25G076000.1 Ceric.25G076000 not classified & original description: pacid=50594640... 0.05 OrthoFinder output from all 47 species
GSVIVT01010810001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014448001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01016759001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g24050.1 LOC_Os01g24050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g06990.1 LOC_Os04g06990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g08270.1 LOC_Os07g08270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g42080.1 LOC_Os11g42080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g21940.1 LOC_Os12g21940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g36506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g39122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g53565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024441_P003 Zm00001e024441 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 63 151
IPR007658 DUF594 263 313
No external refs found!