Gb_18454

Description : transcription factor (DREB)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_18454
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00135920	HRE2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00098700	ERF110,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00099690	RAP2.6,...	Ethylene-responsive transcription factor ERF110...	0.03	OrthoFinder output from all 47 species
AT2G35700	ERF38, ATERF38	ERF family protein 38	0.04	OrthoFinder output from all 47 species
Adi_g059856	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09757	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Als_g36562	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g37615	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013914001	ERF-6-6, ERF6, ATERF6	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
Gb_18418	CRF1	Ethylene-responsive transcription factor CRF1...	0.06	OrthoFinder output from all 47 species
LOC_Os03g15660.1	DREB26, LOC_Os03g15660	Ethylene-responsive transcription factor ERF012...	0.03	OrthoFinder output from all 47 species
MA_12671g0020	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_40338g0010	DREB26	Ethylene-responsive transcription factor ERF012...	0.04	OrthoFinder output from all 47 species
MA_83118g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Spa_g04184	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g08637	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g14734	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g17336	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g22026	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g24188	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g52658	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g21433	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g37433	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e000611_P001	HRE1, Zm00001e000611	Ethylene-responsive transcription factor ERF073...	0.02	OrthoFinder output from all 47 species
Zm00001e019026_P001	CRF3, Zm00001e019026	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e032032_P001	ATERF12, ERF12,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e038525_P001	DREB26, Zm00001e038525	Ethylene-responsive transcription factor ERF013...	0.03	OrthoFinder output from all 47 species
Zm00001e041532_P001	Zm00001e041532	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e041533_P001	ERF38, ATERF38,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0004866	endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030414	peptidase inhibitor activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0061134	peptidase regulator activity	IEP	HCCA
MF	GO:0061135	endopeptidase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	247	296

External Links

No external refs found!

Gb_18454

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation