Gb_18362 (SRA1, KLK, PIR,...)

Aliases : SRA1, KLK, PIR, ATSRA1, PIRP, PIR121

Description : Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 154.0)

Gene families : OG0005627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_18362

Target	Alias	Description	ECC score	Gene Family Method
AT5G18410	SRA1, KLK, PIR,...	transcription activators	0.05	OrthoFinder output from all 47 species
Als_g07499	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.06	OrthoFinder output from all 47 species
Aob_g25754	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.05	OrthoFinder output from all 47 species
GSVIVT01026355001	SRA1, KLK, PIR,...	Cytoskeleton.microfilament network.actin...	0.03	OrthoFinder output from all 47 species
LOC_Os03g05020.1	SRA1, KLK, PIR,...	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.03	OrthoFinder output from all 47 species
Len_g01406	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.02	OrthoFinder output from all 47 species
Lfl_g11317	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.04	OrthoFinder output from all 47 species
MA_10436695g0010	SRA1, KLK, PIR,...	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.04	OrthoFinder output from all 47 species
MA_9839424g0010	SRA1, KLK, PIR,...	Protein PIR OS=Arabidopsis thaliana (sp\|q5s2c3\|pir_arath : 254.0)	0.03	OrthoFinder output from all 47 species
Mp5g00460.1	SRA1, KLK, PIR,...	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.04	OrthoFinder output from all 47 species
Msp_g15500	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.03	OrthoFinder output from all 47 species
Ore_g15062	SRA1, KLK, PIR,...	component *(PIROGI) of SCAR/WAVE ARP2/3-activating...	0.05	OrthoFinder output from all 47 species
Smo160351	SRA1, KLK, PIR,...	Cytoskeleton.microfilament network.actin...	0.02	OrthoFinder output from all 47 species
Solyc11g013280.1.1	SRA1, KLK, PIR,...	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.03	OrthoFinder output from all 47 species
Zm00001e000353_P001	SRA1, KLK, PIR,...	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	IEA	Interproscan
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008081	Cytoplasmic_FMR1-int	1	122
IPR008081	Cytoplasmic_FMR1-int	229	283

External Links

No external refs found!

Gb_18362 (SRA1, KLK, PIR,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation