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Gb_17994 (emb2004)


Aliases : emb2004

Description : RAN GTPase-activating protein 1 OS=Arabidopsis thaliana (sp|q9le82|ragp1_arath : 113.0)


Gene families : OG0006225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17994
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020179001 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g13050.1 LOC_Os06g13050 Peroxidase 65 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g21830.1 emb2004 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g05987 emb2004 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 377 396
IPR001611 Leu-rich_rpt 178 199
IPR001611 Leu-rich_rpt 458 480
IPR001611 Leu-rich_rpt 513 536
IPR001611 Leu-rich_rpt 261 283
IPR001611 Leu-rich_rpt 235 254
IPR001611 Leu-rich_rpt 430 452
IPR001611 Leu-rich_rpt 344 366
IPR001611 Leu-rich_rpt 489 508
IPR001611 Leu-rich_rpt 410 424
IPR001611 Leu-rich_rpt 543 565
No external refs found!