Gb_17716

Description : Matrixin-type metalloprotease

Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17716
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00201730	MMP,...	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
AT1G24140	No alias	Matrixin family protein	0.04	OrthoFinder output from all 47 species
Dac_g11955	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ehy_g30544	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01020151001	MMP	Protein degradation.peptidase families.metallopeptidase...	0.09	OrthoFinder output from all 47 species
GSVIVT01032545001	MMP	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
LOC_Os02g50730.1	MMP, LOC_Os02g50730	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species
LOC_Os06g13180.1	MMP, LOC_Os06g13180	Matrixin-type metalloprotease	0.04	OrthoFinder output from all 47 species
MA_10426152g0010	No alias	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species
Solyc04g005050.1.1	Solyc04g005050	Matrixin-type metalloprotease	0.05	OrthoFinder output from all 47 species
Zm00001e036059_P001	MMP, Zm00001e036059	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031012	extracellular matrix	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001818	Pept_M10_metallopeptidase	206	364
IPR002477	Peptidoglycan-bd-like	108	167

External Links

No external refs found!