Aliases : SVR7
Description : Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana (sp|q8gwe0|pp314_arath : 648.0)
Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G16390 | SVR7 | pentatricopeptide (PPR) repeat-containing protein | 0.1 | OrthoFinder output from all 47 species | |
AT5G46580 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.08 | OrthoFinder output from all 47 species | |
Ala_g02200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0262.g060841 | No alias | not classified & original description: CDS=82-2085 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.15G014300.1 | Ceric.15G014300 | not classified & original description: pacid=50639905... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g07226 | SVR7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003493001 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g08510.1 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc08g077140.1.1 | Solyc08g077140 | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g012670.1.1 | SVR7, Solyc11g012670 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g04939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000850_P001 | SVR7, Zm00001e000850 | Pentatricopeptide repeat-containing protein ATP4,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006409_P001 | Zm00001e006409 | Pentatricopeptide repeat-containing protein At5g46580,... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No external refs found! |