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  5. Gb_16864

Gb_16864 (MCA1)


Aliases : MCA1

Description : mechanosensitive cation channel (MCA)


Gene families : OG0002415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16864
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00084120 MCA1,... Solute transport.channels.MCA mechanosensitive cation channel 0.06 OrthoFinder output from all 47 species
Aev_g13233 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Aev_g48122 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Ala_g01696 MCA1 mechanosensitive cation channel *(MCA) & original... 0.05 OrthoFinder output from all 47 species
Als_g14909 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Als_g14910 MCA2 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Als_g51087 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Aob_g29407 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Aop_g05446 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Cba_g13527 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g31700 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G065900.1 MCA1, Ceric.03G065900 mechanosensitive cation channel *(MCA) & original... 0.06 OrthoFinder output from all 47 species
Dac_g00733 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02563 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os03g06120.3 MCA1, LOC_Os03g06120 mechanosensitive cation channel (MCA) 0.06 OrthoFinder output from all 47 species
Len_g16735 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g37541 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Mp5g19510.1 MCA1 mechanosensitive cation channel (MCA) 0.03 OrthoFinder output from all 47 species
Msp_g20081 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00996 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001243 MCA1 not classified & original description: CDS=164-2053 0.03 OrthoFinder output from all 47 species
Sam_g09606 No alias mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g22464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083540.3.1 MCA1, Solyc02g083540 mechanosensitive cation channel (MCA) 0.04 OrthoFinder output from all 47 species
Solyc03g095820.4.1 MCA1, Solyc03g095820 mechanosensitive cation channel (MCA) 0.03 OrthoFinder output from all 47 species
Zm00001e021032_P001 Zm00001e021032 Cell number regulator 13 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 296 393
No external refs found!