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  5. Gb_16799

Gb_16799


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 107.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16799

Target Alias Description ECC score Gene Family Method Actions
Adi_g036132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046450 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g047959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078959 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32460 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g32861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17181 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g18248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70908 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene00364.t1 Aspi01Gene00364 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03408.t1 Aspi01Gene03408 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03618.t1 Aspi01Gene03618 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08134.t1 Aspi01Gene08134 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09121.t1 Aspi01Gene09121 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21324.t1 Aspi01Gene21324 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22968.t1 Aspi01Gene22968 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29405.t1 Aspi01Gene29405 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29587.t1 Aspi01Gene29587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30383.t1 Aspi01Gene30383 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene32979.t1 Aspi01Gene32979 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35033.t1 ORF120, Aspi01Gene35033 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35424.t1 Aspi01Gene35424 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene37633.t1 Aspi01Gene37633 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49991.t1 Aspi01Gene49991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54200.t1 ORF240B, Aspi01Gene54200 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54301.t3 ORF145A, Aspi01Gene54301 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63791.t1 Aspi01Gene63791 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72777.t1 Aspi01Gene72777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24494 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00288 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_00434 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_05294 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_05523 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_06074 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_06223 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_06978 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_08095 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_08402 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_10322 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_13701 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_13962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_22414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_23548 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_26132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_26878 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_27534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_27945 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28242 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_29919 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_30261 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30314 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_33365 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_33583 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_34551 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_36579 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_37614 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_38136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_39185 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_39504 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_40384 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_40853 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_41697 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Lfl_g10135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12630 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12768 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04307 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18328 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27459 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33806 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_27890V3.1 Pp3c4_27890 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g13439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 10 60
No external refs found!