1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_16135

Gb_16135 (ATHMA2, HMA2)


Aliases : ATHMA2, HMA2

Description : P1B-type heavy metal cation-transporting ATPase (HMA)


Gene families : OG0001874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00176690 ATHMA2, HMA2,... Solute transport.primary active transport.P-type ATPase... 0.04 OrthoFinder output from all 47 species
AT2G19110 ATHMA4, HMA4 heavy metal atpase 4 0.02 OrthoFinder output from all 47 species
Aev_g32978 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Aev_g38059 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ala_g28963 ATHMA4, HMA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02395 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Dac_g12455 ATHMA4, HMA4 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Dac_g39884 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Msp_g44220 ATHMA4, HMA4 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016421 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021162 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 19 74
No external refs found!