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  5. Gb_15692

Gb_15692 (KS, KS1, ATKS1, ATKS, GA2)


Aliases : KS, KS1, ATKS1, ATKS, GA2

Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 127.0)


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15692
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Ehy_g30539 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12468 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_13703 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.05 OrthoFinder output from all 47 species
Gb_17366 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Gb_36202 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.02 OrthoFinder output from all 47 species
Gb_39147 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.05 OrthoFinder output from all 47 species
Gb_39616 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Lfl_g23246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_34273g0020 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Ore_g31705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34951 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63465 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006545.1.1 KS, KS1, ATKS1,... Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!