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  5. Gb_15126

Gb_15126


Description : no hits & (original description: none)


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15126
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00025560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.04 OrthoFinder output from all 47 species
AT5G60520 No alias Late embryogenesis abundant (LEA) protein-related 0.03 OrthoFinder output from all 47 species
Aev_g16075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.03 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.04 OrthoFinder output from all 47 species
GSVIVT01005843001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01005845001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00316 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g39989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7605738g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g078930.3.1 Solyc02g078930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g11914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e008224_P001 Zm00001e008224 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028269_P001 Zm00001e028269 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 275 331
No external refs found!