Gb_13655 (ATCBP80, ABH1, ENS, CBP80)

Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)

Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_13655

Target	Alias	Description	ECC score	Gene Family Method
AT2G13540	ATCBP80, ABH1, ENS, CBP80	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Ceric.38G051300.1	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.05	OrthoFinder output from all 47 species
Cre12.g524100	No alias	RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA...	0.01	OrthoFinder output from all 47 species
Dcu_g08222	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01037230001	ATCBP80, ABH1, ENS, CBP80	RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA...	0.03	OrthoFinder output from all 47 species
Lfl_g02038	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.04	OrthoFinder output from all 47 species
MA_10436272g0010	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
MA_13750g0010	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
Sam_g12525	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Sam_g28009	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.05	OrthoFinder output from all 47 species
Solyc10g005530.3.1	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
Spa_g26897	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.03	OrthoFinder output from all 47 species
Tin_g01260	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.03	OrthoFinder output from all 47 species
Zm00001e001643_P004	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043138	3'-5' DNA helicase activity	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015172	MIF4G-like_typ-1	344	468
IPR015174	MIF4G-like_typ-2	502	760
IPR003890	MIF4G-like_typ-3	26	194

External Links

No external refs found!

Gb_13655 (ATCBP80, ABH1, ENS, CBP80)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation