Aliases : EMB3011
Description : RNA helicase (Prp16)
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G27900 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g008210 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g107993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g14240 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02597 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ala_g37436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01897 | No alias | RNA helicase *(Prp22) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g11041 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g19131 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g15706 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g64809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g17488 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G059500.1 | Ceric.01G059500 | not classified & original description: pacid=50591809... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.04G078700.1 | Ceric.04G078700 | not classified & original description: pacid=50630845... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.15G036900.1 | Ceric.15G036900 | RNA helicase *(Prp22) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.21G075900.1 | EMB3011, Ceric.21G075900 | RNA helicase *(Prp16) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G064800.1 | ESP3, EMB2733,... | RNA helicase *(Prp2) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000796.23 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000984.27 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021589.28 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00022075.25 | No alias | RNA processing.RNA splicing.spliceosome... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g11433 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007911001 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.09 | OrthoFinder output from all 47 species | |
GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g11370.1 | LOC_Os01g11370 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g24760.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g29092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10217744g0010 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.03 | OrthoFinder output from all 47 species | |
Mp2g13680.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g14081 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03086 | No alias | RNA helicase *(Prp22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g21732 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g07808 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g66576 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g00856 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g05341 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g17516 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16823 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
Smo82212 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g115390.4.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g076910.2.1 | EMB3011, Solyc10g076910 | RNA helicase (Prp16) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g12381 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g17882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25913 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g01282 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014112_P001 | Zm00001e014112 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e022095_P001 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004386 | helicase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
CC | GO:0018995 | host cellular component | IEP | HCCA |
CC | GO:0033643 | host cell part | IEP | HCCA |
CC | GO:0033646 | host intracellular part | IEP | HCCA |
CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
CC | GO:0042025 | host cell nucleus | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No external refs found! |