1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_12946

Gb_12946


Description : E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana (sp|q8lpn7|rng1l_arath : 167.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12946

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00089020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AT1G50350 No alias BEST Arabidopsis thaliana protein match is: RING/U-box... 0.03 OrthoFinder output from all 47 species
AT1G55530 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G40830 RHC1A RING-H2 finger C1A 0.02 OrthoFinder output from all 47 species
AT3G10815 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G26400 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g44017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G049400.1 Ceric.32G049400 not classified & original description: pacid=50598110... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g02670.1 LOC_Os11g02670 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.05 OrthoFinder output from all 47 species
Ore_g10219 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g25212 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 218 260
IPR039525 RNF126-like_zinc-ribbon 9 39
No external refs found!