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  5. Gb_12862

Gb_12862 (TBR)


Aliases : TBR

Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 233.0)


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12862

Target Alias Description ECC score Gene Family Method Actions
AT2G40150 TBL28 TRICHOME BIREFRINGENCE-LIKE 28 0.07 OrthoFinder output from all 47 species
AT3G28150 TBL22 TRICHOME BIREFRINGENCE-LIKE 22 0.04 OrthoFinder output from all 47 species
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.05 OrthoFinder output from all 47 species
Ala_g03631 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12811 YLS7, TBL17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27770 TBL26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08757 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09434 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0220.g058643 TBL11 not classified & original description: CDS=289-1827 0.03 OrthoFinder output from all 47 species
Dac_g13717 TBL2 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20904 TBL14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024714001 PMR5, TBL44 Protein PMR5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01028123001 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_06481 TBL28 xylan O-acetyltransferase (XOAT) 0.04 OrthoFinder output from all 47 species
LOC_Os01g46400.1 TBL19, LOC_Os01g46400 Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g19470.1 TBL6, LOC_Os03g19470 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436441g0010 TBL1 xylan O-acetyltransferase (XOAT) 0.06 OrthoFinder output from all 47 species
MA_10436708g0010 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_31151g0010 TBL1 xylan O-acetyltransferase (XOAT) 0.04 OrthoFinder output from all 47 species
MA_467548g0010 PMR5, TBL44 Protein PMR5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g06125 TBL16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08526 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006224 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g068430.3.1 TBL38, Solyc01g068430 Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g087120.4.1 TBL22, Solyc02g087120 Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g052450.3.1 TBL33, Solyc05g052450 xylan O-acetyltransferase (XOAT) 0.03 OrthoFinder output from all 47 species
Solyc07g055780.3.1 TBL43, Solyc07g055780 Protein trichome birefringence-like 43 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g007450.2.1 TBL42, Solyc10g007450 Protein trichome birefringence-like 42 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e013470_P001 TBL12, Zm00001e013470 Protein trichome birefringence-like 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027860_P001 TBR, Zm00001e027860 Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 67 242
No external refs found!