1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_12830

Gb_12830 (FTSH8)


Aliases : FTSH8

Description : component FtsH1|2|5|6|8 of FtsH plastidial protease complexes


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00108310 VAR2, FTSH2,... Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Adi_g087056 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Adi_g114970 VAR2, FTSH2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02360 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ala_g14174 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Als_g07586 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Als_g20560 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Aob_g10132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17362 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Aop_g14163 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Azfi_s0022.g016135 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Cba_g13333 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Cba_g75374 VAR2, FTSH2 EXECUTER-cleavage protease *(FtsH2) & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.03G093200.1 FTSH8, Ceric.03G093200 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Ceric.22G054100.1 FTSH8, Ceric.22G054100 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.06 OrthoFinder output from all 47 species
Cre17.g720050 FTSH8 Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
Dac_g10534 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Dcu_g13134 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Dde_g23743 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Ehy_g03938 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
GSVIVT01020760001 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
LOC_Os06g45820.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.11 OrthoFinder output from all 47 species
Len_g21745 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Len_g44862 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Mp4g19200.1 VAR2, FTSH2 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
Msp_g02086 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Nbi_g11426 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Ore_g26838 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Ore_g45571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09681 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Ppi_g17712 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Sam_g18762 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Sam_g37450 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Smo149856 VAR2, FTSH2 Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 OrthoFinder output from all 47 species
Spa_g25819 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Tin_g04117 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Zm00001e030358_P003 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.09 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 485 674
IPR041569 AAA_lid_3 426 469
IPR003959 ATPase_AAA_core 271 402
No external refs found!