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  5. Gb_12670

Gb_12670


Description : caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)


Gene families : OG0000545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12670
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00227270 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00228690 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.05 OrthoFinder output from all 47 species
AMTR_s02018p00009260 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G34050 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
Adi_g117038 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aev_g28107 CCOAMT EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g09750 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Als_g59073 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g69967 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g08637 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g14743 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g13597 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g29780 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015244001 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
GSVIVT01015246001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01020603001 No alias Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.02 OrthoFinder output from all 47 species
GSVIVT01031715001 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.03 OrthoFinder output from all 47 species
Gb_23220 CCoAOMT1 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38900.1 CCoAOMT1, LOC_Os08g38900 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.02 OrthoFinder output from all 47 species
Lfl_g27155 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
MA_9065834g0010 CCoAOMT1 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
Ore_g03924 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g23651 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo101568 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.02 OrthoFinder output from all 47 species
Smo80209 CCoAOMT1 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA... 0.02 OrthoFinder output from all 47 species
Solyc10g050160.2.1 CCoAOMT1, Solyc10g050160 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.03 OrthoFinder output from all 47 species
Tin_g43456 CCoAOMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e024348_P001 CCoAOMT1, Zm00001e024348 caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!