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  5. Gb_12394

Gb_12394 (HB-2, ATHB2, ATHB-2, HAT4)


Aliases : HB-2, ATHB2, ATHB-2, HAT4

Description : Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica (sp|a2z1u1|hox11_orysi : 98.6)


Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12394

Target Alias Description ECC score Gene Family Method Actions
AT4G37790 HAT22 Homeobox-leucine zipper protein family 0.03 OrthoFinder output from all 47 species
Als_g06206 HAT14 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49435.t1 HB-2, ATHB2,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01002447001 HAT22 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009274001 HAT22 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45570.1 ATHB17, HB17,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os03g12860.1 HAT22, LOC_Os03g12860 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04850.1 HB4, ATHB-4,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os06g04870.1 HB4, ATHB-4,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_12174g0010 HAT22 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_860238g0010 HB-2, ATHB2, ATHB-2, HAT4 transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Solyc05g008050.3.1 ATHB17, HB17,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Tin_g28770 HAT3 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e020345_P001 ATHB17, HB17,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e036547_P001 HAT14, Zm00001e036547 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006712 HD-ZIP_N 8 124
No external refs found!