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Gb_12198 (MDF, DOT2)


Aliases : MDF, DOT2

Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana (sp|q9lfe0|dot2_arath : 625.0)


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00135160 MDF, DOT2,... SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT5G16780 MDF, DOT2 SART-1 family 0.06 OrthoFinder output from all 47 species
Adi_g036689 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49913 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03521 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049800.1 MDF, DOT2,... not classified & original description: pacid=50634914... 0.05 OrthoFinder output from all 47 species
Cre03.g156100 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g17126 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035173001 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
LOC_Os02g30730.2 MDF, DOT2, LOC_Os02g30730 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g10540 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10410 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g008460.1.1 MDF, DOT2, Solyc11g008460 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc11g008470.2.1 MDF, DOT2, Solyc11g008470 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e018582_P001 MDF, DOT2, Zm00001e018582 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 865 910
IPR005011 SNU66/SART1 382 850
No external refs found!