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  5. Gb_11317

Gb_11317 (ATCYP20-2, CYP20-2)


Aliases : ATCYP20-2, CYP20-2

Description : component PnsL5 of NDH lumen subcomplex L. protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11317

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00225920 ATCYP20-2,... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AT3G62030 ROC4 rotamase CYP 4 0.03 OrthoFinder output from all 47 species
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.07 OrthoFinder output from all 47 species
Azfi_s0011.g012462 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=264-1001 0.05 OrthoFinder output from all 47 species
Azfi_s1227.g099989 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=45-827 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000190.59 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.30 ROC5, ATCYP1 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
GSVIVT01000919001 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.07 OrthoFinder output from all 47 species
GSVIVT01028226001 ROC4 Protein modification.protein folding and quality... 0.11 OrthoFinder output from all 47 species
LOC_Os01g18210.1 ROC4, LOC_Os01g18210 protein folding catalyst 0.02 OrthoFinder output from all 47 species
LOC_Os05g01270.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.06 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.03 OrthoFinder output from all 47 species
Sam_g15124 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.11 OrthoFinder output from all 47 species
Spa_g14689 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025457_P001 ROC4, Zm00001e025457 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Zm00001e027678_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.05 OrthoFinder output from all 47 species
Zm00001e029710_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 103 258
No external refs found!